Publications

(2022). Criticality and network structure drive emergent oscillations in a stochastic whole-brain model. Journal of Physics Complexity.

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(2022). Disentangling the critical signatures of neural activity. Scientific Reports.

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(2021). Mutual Information Disentangles Interactions from Changing Environments. Physical Review Letters.

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(2021). Effective Resource Competition Model for Species Coexistence. Physical Review Letters.

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(2021). Neuronal Avalanches Across the Rat Somatosensory Barrel Cortex and the Effect of Single Whisker Stimulation. Frontiers in Systems Neuroscience.

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(2021). The Widened Pipe Model of plant hydraulic evolution. Proceedings of the National Academy of Science.

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(2021). Statistical physics of DNA hybridization. Physical Review E.

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(2021). An ecological approach to structural flexibility in online communication systems. Nature communications.

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(2021). Digital proximity tracing on empirical contact networks for pandemic control. Nature communications.

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(2021). Ginzburg-Landau amplitude equation for nonlinear nonlocal models. Physical Review E.

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(2021). Neutral theory for competing attention in social networks. Physical Review Research.

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(2021). Dimensionality reduction of complex dynamical systems.. iScience.

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(2021). True scale-free networks hidden by finite size effects.. Proceedings of the National Academy of Science.

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(2021). Constrained proteome allocation affects coexistence in models of competitive microbial communities. The ISME Journal.

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(2020). Asymmetric stochastic resetting: Modeling catastrophic events. Physical Review E.

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(2020). Absorbing-state transition in a coevolution model with node and linkstates in an adaptive network: network fragmentation transition atcriticality. New Journal of Physics.

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(2020). Upscaling statistical patterns from reduced storage in social and life science big datasets. Entropy.

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(2020). Building an irreversible Carnot-like heat engine with an overdamped harmonic oscillator. Journal of Statistical Mechanics: Theory and Experiment.

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(2020). Taxonomic classification methodf or metagenomics based on core protein families with Core-Kaiju. Nucleic Acids Research.

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(2020). River basin salinization as a form of aridity. Proceedings of the National Academy of Science.

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(2020). Scaling and criticality in a phenomenological renormalization group. Phys. Rev. Research.

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(2020). Dynamic metabolic adaptation can promote species coexistence in competitive communities. PLoS Comput Biol.

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(2020). DNA sequence symmetries from randomness: the origin of the Chargaff’s second parity rule. Briefings in Bioinformatics.

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(2020). Entropy production in systems with unidirectional transitions. Physical Review Research.

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(2020). Finite-time adiabatic processes: Derivation and speed limit. Physical Review E.

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(2020). Inferring entropy production from short experiments. Physical Review Letters.

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(2020). Work fluctuations and Jarzynski equality in stochastic resetting. Physical Review Letters.

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(2020). Thermodynamic uncertainty relations in a linear system. The European Physical Journal B.

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(2020). Spatial Patterns Emerging from a Stochastic Process Near Criticality. Physical Review X.

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(2020). Entropy production for partially observed harmonic systems. Journal of Statistical Mechanics: Theory and Experiment.

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(2019). Neutral and niche forces as drivers of species selection. J. Theor. Biol..

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(2019). Upscaling human activity data: an ecological perspective. arXiv.

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(2019). Inferring macro‐ecological patterns from local presence/absence data. Oik.

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(2019). Deep learning systems as complex networks. Journal of Complex Networks.

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(2019). Impact of globalization on the resilience and sustainability of natural resources. Nature Sustainability.

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(2019). On the probabilistic nature of the species-area relation. Jour. Theor. Biol..

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(2019). Finite-time and Fixed-time consensus of multi-agent networks with pinning control and noise perturbation. SIAM Journal on Applied Mathematics.

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(2019). Archetypes of human cognition defined by time preference for reward and their brain correlates: An evolutionary trade-off approach. NeuroImage.

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(2018). The elixir phase of chain molecules. Proteins: Structure, Function, and Bioinformatics.

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(2018). Modelling determinants of extinction across two Mesozoic hyperthermal events. RSPB.

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(2018). Entropy production for coarse-grained dynamics. New Journal of Physics.

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(2018). Similarities and differences between non-equilibrium steady states and time-periodic driving in diffusive systems. New Journal of Physics.

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(2018). Zipf's and Taylor's laws. Phys. Rev. E.

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(2018). River landscapes and optimal channel networks. PNAS.

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(2018). Signature of Pareto optimization in the Escherichia coli proteome. Scientific Reports.

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(2018). A universal model for predicting human migration under climate change: examining future sea level rise in Bangladesh. Environmental Research Letters.

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(2018). The Global Food‐Energy‐Water Nexus. Reviews of Geophysics.

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(2018). Equalization of the network sensitivity enhances predictive power at criticality in a whole-brain model. arXiv.

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(2018). The distance decay of similarity in tropical rainforests. A spatial point processes analytical formulation. TBP.

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(2017). Neutral Theory and Scale-Free Neural Dynamics. Physical Review X.

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(2017). Entropy production in systems with random transition rates close to equilibrium. Physical Review E.

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(2017). The challenge of understanding the water-food nexus complexity. Advances in Water Resources.

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(2017). Upscaling species richness and abundances in tropical forests. Science Advances.

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(2017). A Phenomenological Spatial Model for Macro-Ecological Patterns in Species-Rich Ecosystems. Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology.

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(2017). Covariations in ecological scaling laws fostered by community dynamics. PNAS.

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(2017). Explorability and the origin of network sparsity in living systems. Scientific Reports.

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(2017). Reconciling cooperation, biodiversity and stability in complex ecological communities. arXiv.

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(2017). Collapse of resilience patterns in generalized Lotka-Volterra dynamics and beyond. Physical Review E.

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(2017). Warnings and Caveats in Brain Controllability. NeuroImage.

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(2017). Phase diagram of thick ribbons in a bad solvent. arXiv.

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(2017). Feasibility and coexistence of large ecological communities. Nature Communications.

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(2017). Testing a general approach to assess the degree of disturbance in tropical forests. Journal of Vegetation Science.

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(2017). Species coexistence in a neutral dynamics with environmental noise. Journal of Theoretical Biology.

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(2016). Biodiversity of Tropical Forests. bioRxiv.

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(2016). A Data Driven Network Approach to Rank Countries Production Diversity and Food Specialization. PLOS ONE.

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(2016). Species survival and scaling laws in hostile and disordered environments. Physical Review E.

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(2016). What commodities and countries impact inequality in the global food system?. Environmental Research Letters.

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(2016). Lattice Models for Granular-Like Velocity Fields: Hydrodynamic Description. J. Stat. Phys..

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(2016). Statistical mechanics of ecological systems: Neutral theory and beyond. Reviews of Modern Physics.

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(2016). Application of optimal data-based binning method to spatial analysis of ecological datasets. SpaSta.

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(2016). Cooperation, competition and the emergence of criticality in communities of adaptive systems. Journal of Statistical Mechanics: Theory and Experiment.

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